PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010088096.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 307aa    MW: 34025.3 Da    PI: 6.7116
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010088096.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573114.46.8e-36103195298
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                     lfqrlwse+Dei++L+G+id++aktg+  +++d++afy+f+kks++++++k+ql++K+rrLKkK+ ++ kk     + + +k+h+ ++f+lskki
  XP_010088096.1 103 LFQRLWSEDDEIAILKGMIDYAAKTGAdAAVADMNAFYDFIKKSLHIDATKTQLSDKVRRLKKKYVNNLKK-----KYNPTKPHELEAFQLSKKI 192
                     69*************************66677***************************************.....77889************** PP

          DUF573  96 Wgs 98 
                     Wgs
  XP_010088096.1 193 WGS 195
                     *95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045046.5E-33104194IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MAPKRAPHLD DPPTVSSSSD EEEASSEEAS GSEDDEQEVS DSNVKPKEET PPKAKKPRSK  60
PSAMPSRQSV KRTKKSDSNA ENGGSEEEEE AKMSGGDDSK KLLFQRLWSE DDEIAILKGM  120
IDYAAKTGAD AAVADMNAFY DFIKKSLHID ATKTQLSDKV RRLKKKYVNN LKKKYNPTKP  180
HELEAFQLSK KIWGSREPKS NGTAKSNQKG KSELLLSPAA PAEIETTAID RKAGPSASLS  240
ELIRFDKSLP EHVVKQGLDL ISESKKAELE AKWRMLHIAE FELFVKKSQL ISEQSKLILE  300
AIKPSDD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160173RRLKKKYVNNLKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010088096.10.0hypothetical protein L484_014842
TrEMBLW9QER50.0W9QER5_9R
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.15e-22DNA-binding storekeeper protein-related transcriptional regulator